PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj6g3v0753150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NF-YB
Protein Properties Length: 47aa    MW: 5359.89 Da    PI: 4.3701
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj6g3v0753150.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB36.61.1e-111277197
            NF-YB 71 latlGfedyveplkvylkkyrelegek 97
                     ++tlGfedyveplkvyl+++re+egek
  Lj6g3v0753150.1  1 MTTLGFEDYVEPLKVYLQRFREMEGEK 27
                     89***********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471134.6E-5142IPR009072Histone-fold
Gene3DG3DSA:1.10.20.107.9E-9137IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 47 aa     Download sequence    Send to blast
MTTLGFEDYV EPLKVYLQRF REMEGEKSVA ARDRDAPSSN ASNSSFE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.84121e-75cell culture| floral bud| flower| pod| root
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014523242.17e-22PREDICTED: nuclear transcription factor Y subunit B-3-like
TrEMBLA0A0L9VBC03e-22A0A0L9VBC0_PHAAN; Uncharacterized protein
TrEMBLA0A0S3S6N13e-22A0A0S3S6N1_PHAAN; Uncharacterized protein
STRINGGLYMA18G08620.15e-20(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.11e-14nuclear factor Y, subunit B3